Eutrophication is a serious problem in Lake Victoria as a result of enrichment by nutrients transported by the rivers draining into it. River Nzoia is one of the main rivers draining into the lake. The main aim of this study was to simulate the level of nitrates using MIKE 11 and to establish relationship between nitrogen and phosphorus. The model was calibrated using water quality data for 2009 and validated with March 2013 data and then it was used to simulate nitrate concentration for the wet month of April 2013. The model performance was good with R2 values of between 0.87 and 0.98 and EF values of between 0.73 and 0.96. From the simulations, the effluent discharge from municipal and industrial wastewater ponds elevated the concentration of the nitrates in the river. Analysis of the concentrations of nitrates for wet and dry periods showed significant variations indicating significant contributions from the catchment through run-off. The relationship between total nitrogen and total phosphorus was analysed and found to have a strong positive correlation (r = 0.714, p < 0.05) indicating that both originate from similar sources or are influenced by the same factors such as agriculture.

Lake Victoria, one of the largest freshwater lakes in the world supporting the lives of about 30 million people in Kenya, Uganda and Tanzania (Khan et al. 2011), is under threat from pollution. Eutrophication is a serious problem in Lake Victoria as characterised by the presence of water hyacinth. Nitrogen and phosphorus are the most important nutrients responsible for eutrophication in lakes and streams. In lakes, phosphorus is the limiting nutrient and therefore is the centre of interest in the control of eutrophication.

River Nzoia is the largest river on the Kenyan side of Lake Victoria basin and therefore any change in water quality (WQ) of the river will ultimately affect the lake. It is the source of water for industrial, domestic and agricultural activities in the Nzoia catchment. The river receives both non-point source pollution from the nutrient-rich agricultural run-off from the catchment and point sources from the agro-based industries and municipal wastewater treatment plants. According to Nyongesa (2005), River Nzoia contributes the largest quantities of nitrogen and phosphorus as compared to other rivers draining the Kenyan portion of L. Victoria. Carrying out compressive assessment require huge resources which are not available in most countries in Africa. Models are cost-effective in pollution monitoring and prediction of future WQ of rivers and streams (Deksissa et al. 2004) and they can be used in the study of eutrophication and assessment of the effects of point and diffuse pollution (Erturk 2010).

One-dimensional models, such as MIKE 11 and QUAL2E/K, are commonly used in river systems while two- and three-dimensional models are typically used in reservoirs, lakes, and estuaries (Razdar et al. 2011). Cox (2003) suggested that complex models like MIKE-11 and QUAL2E should be considered because they include a large number of processes that could be used in research not only for oxygen but also other chemical properties of water. MIKE 11 model was used in this study due to its hydrodynamic component which makes it suitable for rivers which are unsteady like River Nzoia. The model was used by Chibole (2013) and Kanda et al. (2015) for simulation of dissolved oxygen and biochemical oxygen demand for River Sosiani (a tributary of River Nzoia) and River Nzoia respectively and was found to be reliable in WQ modelling. Using MIKE 11, this study aimed at investigating the behaviour of nitrates in River Nzoia under the existing agricultural practices and to establish the relationship between nitrogen and phosphorus.

Study area

River Nzoia is in the western region of Kenya in the Lake Victoria Basin. The study area is the middle section of River Nzoia between Webuye and Mumias towns (a distance of about 60 km). It lies between latitudes 0 °35.157′ N and 0 ° 22.165′ N and longitudes 34 ° 48.411′ E and 34 ° 28.962′ E (Figure 1). The elevation decreases gradually, with an average slope of about 0.29%, from 1,459 m at Webuye to about 1,297 m above sea level at Mumias town. The main tributaries in the section include Rivers Kuywa, Chwele and Khalaba.
Figure 1

Study area showing land use and sampling points.

Figure 1

Study area showing land use and sampling points.

Close modal

The predominant type of land use (Figure 1) is rain-fed herbaceous crops mainly sugarcane plantations owned by the out-growers of the two major sugar industries of Mumias and Nzoia. The irrigated herbaceous crops are found around the sugar factories forming the nucleus of the sugarcane farms owned by the sugar factories.

Data collection

In this study, five sampling sites (Figure 1) were used for the measurement of the WQ parameters and discharge. The sampling was done two times each for the months of March and April and the average values used for the simulations. Monthly WQ and discharge data for 2009 were used to calibrate the model while the data collected in March 2013 was used for validation. The sampling points are described in Table 1.

Table 1

Location and characteristics of the sampling points

Sampling pointChainage (km)Altitude (m)LongitudeLatitudeRemarks
Webuye Bridge (S1) 1,459 34.80 ° E 0.59 ° N Upstream Boundary of the model. It is the upstream of effluent discharge point for Pan paper mills and Webuye Municipal Wastewater Treatment Plant (WWTP) 
S2 1,453 34.78 ° E 0.58 ° N Downstream of discharge from Pan paper mills and Webuye Municipal WWTP 
S3 31 1,342 34.62 ° E 0.45 ° N Dorufu Bridge-Downstream of R. Kuywa which Nzoia Sugar Factory Discharge their Industrial Effluents 
S4 54.6 1,300 34.50 °E 0.37 ° N Upstream of MSF (at the intake of Mumias water supply) and downstream of R. Khalaba which carries pollutants from Bungoma WWTP 
Mumias Bridge (S5) 56 1,297 34.49 ° E 0.37 ° N At Mumias Bridge RGS. Downstream of MSF. 300 m downstream of discharge points of MSF WWTP. Model downstream boundary 
Sampling pointChainage (km)Altitude (m)LongitudeLatitudeRemarks
Webuye Bridge (S1) 1,459 34.80 ° E 0.59 ° N Upstream Boundary of the model. It is the upstream of effluent discharge point for Pan paper mills and Webuye Municipal Wastewater Treatment Plant (WWTP) 
S2 1,453 34.78 ° E 0.58 ° N Downstream of discharge from Pan paper mills and Webuye Municipal WWTP 
S3 31 1,342 34.62 ° E 0.45 ° N Dorufu Bridge-Downstream of R. Kuywa which Nzoia Sugar Factory Discharge their Industrial Effluents 
S4 54.6 1,300 34.50 °E 0.37 ° N Upstream of MSF (at the intake of Mumias water supply) and downstream of R. Khalaba which carries pollutants from Bungoma WWTP 
Mumias Bridge (S5) 56 1,297 34.49 ° E 0.37 ° N At Mumias Bridge RGS. Downstream of MSF. 300 m downstream of discharge points of MSF WWTP. Model downstream boundary 

Model set-up

The Hydrodynamic module (HD) of MIKE 11 (DHI 2009) was used to simulate flow in the river. The model was calibrated and used in the advection-dispersion (AD) module. WQ module was developed and integrated with the AD module for simulating the river's WQ model. The HD and AD model were calibrated as described in Kanda et al. (2015). The main calibration parameters were bed resistance for HD module, and dispersion coefficient and dispersion exponent for the AD module since electrical conductivity which was used for calibration is a conservative parameter and therefore decay is zero. For WQ module the constants shown in Table 2 were used where most of them were default values in the model while others were from the reference Manual (DHI 2009). The WQ module was implemented using predefined Ecolab templates.

Table 2

Constants for nitrates modelling

ParameterValue
Nitrogen Content: Ratio of ammonia released at BOD decay 0.29 gNH4/g BOD 
Nitrogen Content: Uptake of ammonia in plants 0.066 gNH4/g O2 
Nitrogen Content: Uptake of ammonia in bacteria 0.109 gNH4/g O2 
Nitrification: Reaction order 1 = first order process
2 = half order process 
Nitrification: Ammonia decay rate at 20 °C 1.54 per day 
Nitrification: Temperature coefficient for nitrification 1.13 
Nitrification: Oxygen demand by nitrification 4.47 gO2/gNH4 
ParameterValue
Nitrogen Content: Ratio of ammonia released at BOD decay 0.29 gNH4/g BOD 
Nitrogen Content: Uptake of ammonia in plants 0.066 gNH4/g O2 
Nitrogen Content: Uptake of ammonia in bacteria 0.109 gNH4/g O2 
Nitrification: Reaction order 1 = first order process
2 = half order process 
Nitrification: Ammonia decay rate at 20 °C 1.54 per day 
Nitrification: Temperature coefficient for nitrification 1.13 
Nitrification: Oxygen demand by nitrification 4.47 gO2/gNH4 

Simulation of nitrates

The model calibration for the WQ module was done using monthly data of 2009. Model performance was assessed using the coefficient of determination (R2), Nash-Sutcliffe Efficiency (EF) and Percent Bias (PBIAS). After calibration, the model was validated using data collected in March 2013 and the validated model was used to simulate the nitrate concentrations for the month of April 2013. The performance of the model is indicated in Table 3.

Table 3

Model performance

PeriodR2EFPBIAS
Calibration 0.98 0.96 −1.77 
Validation 0.96 0.95 −2.7 
Simulation run 0.87 0.73 −2.8 
PeriodR2EFPBIAS
Calibration 0.98 0.96 −1.77 
Validation 0.96 0.95 −2.7 
Simulation run 0.87 0.73 −2.8 

The nitrate concentrations increased due to effluent from Webuye WWTP before it decreased gradually until the end of the section where it suddenly increased due to effluent from Mumias sugar Factory (MSF) treatment ponds as shown in Figure 2. The possible explanation for low nitrate concentrations at the lower sections of the river reach is due to increase in inflows from rivers Kuywa, Chwele, and Khalaba, and other small tributaries and therefore greater dilution as explained by Chimwanza et al. (2006). The elevated nitrate concentration after discharge from Webuye WWTP and MSF industrial and municipal effluent indicate that sewage introduction in the river caused a sudden increase in nitrate levels as compared to the introduction of diffuse sources of nitrates via runoff in Kuywa, Chwele and Khalaba streams feeding the river.
Figure 2

Nitrate simulations.

Figure 2

Nitrate simulations.

Close modal

In order to assess the role of rainfall in the concentration of nitrates in the river, the variations in the concentrations for wet months and dry months were analysed between 2009 and 2013. Correlation analysis for the sets of data indicated weak relationship (r = 0.45). The ANOVA results showed significant variation (p < 0.05) which confirm the observed variations in the values. This was consistent with studies by Mokaya et al. (2004) which indicated a strong positive relationship between nitrate and discharge. Nzoia basin is characterised by large maize plantations in the upper parts and sugar belts in the middle region with a substantial application of fertilisers, like Di-Ammonium Phosphate (DAP), Urea, and Calcium Ammonium Nitrate (CAN), which are important sources of nitrogen. Thus, the high concentrations of nitrates can be explained by its accumulation in soils during dry periods which are later mobilised and transported by higher rainfall, soil moisture, runoff, and base flow generation to the streams (Burgos 2012). A Study by Omwoma et al. (2012) established that retention ponds dug in the sugarcane plantations of Nzoia basin had high concentrations of nitrates and therefore it shows that nutrients such as nitrogen leach from these plantations and eventually end up in River Nzoia through the various streams. Crops such as maize and sugarcane which form the bulk of crops in the Nzoia catchment, leak substantial amounts of nitrates compared to perennial crops (Randall & Mulla 2001) since the latter, due to their extensive root system, take up nutrients more efficiently and therefore require reduced amount of nutrients through fertilizer application hence reduced fertilizer run-off.

Nitrogen and phosphorus relationship

Establishing the relationship between these two important nutrients provides a joint mechanism for addressing the problem of eutrophication. However, the data for phosphorus for river Nzoia is limited, unlike nitrogen. Using the data observed for the months of March and April 2013, scatter plot of total nitrogen (TN) and total phosphorus (TP) was plotted which gave R2 of 0.51 as illustrated in Figure 3. It can be deduced that TN and TP have a fairly strong positive relationship with r of 0.714. These values were higher than those found by Manssour & Al-Mufti (2010) which indicated that the relationship between TN and TP had R2 of 0.37. Both TP and TN originate from anthropogenic processes. Agriculture is the main sources of nitrogen and phosphorus (Kimwaga et al. 2011). Findings by Tao et al. (2010) showed that nitrogen and phosphorus had a strong positive correlation with fertiliser application.
Figure 3

Total Phosphorus versus TN.

Figure 3

Total Phosphorus versus TN.

Close modal

From Figure 3, 51 percent of the variation in phosphorus can be explained by variation in nitrogen. This is because, apart from agricultural activities like fertilisers which contribute to both nutrients, nitrogen contribution from other sources such as atmospheric deposition can be significant. According to studies by Pieterse et al. (2003), fertilisers contributed virtually all the phosphorus into the river and about 90 percent of nitrogen with atmospheric deposition contributing the rest. However, Mayer et al. (2002) found that up to about 40 percent of riverine nitrate originated from atmospheric deposition.

This study assessed the concentration of nitrates in River Nzoia using MIKE 11 which is an unsteady –state one-dimensional model. Nitrates showed significant seasonal variation with low concentrations being observed during low flow period but high concentrations during the wet months. This suggested that significant contributions of nitrates from the catchment could be attributed to run-off. The study also noted elevated concentrations of nitrates as a result of discharge from industrial wastes from MSF and wastewater stabilisation ponds in Webuye.

Owing to the importance of nutrients in the eutrophication process with phosphorus being the limiting nutrient, the relationship between TN and TP was analysed and found to have a positive correlation. This indicated that P and N have similar factors affecting their concentrations in a river. Phosphorus and nitrogen originate mostly from agricultural activities. The Nzoia catchment is characterised by agricultural activities with the growing of sugarcane dominating the middle catchment where the study was carried out while the upper part of the catchment has extensive plantations of maize (Trans- Nzoia region) and wheat and maize in Uasin-Gishu areas. These crops require the intensive application of fertilisers such as DAP, CAN, and Urea. The study demonstrated that mathematical models such as MIKE 11 are good in the modelling of nutrients such as nitrates and thus aid in monitoring and management of pollution in rivers. Further studies could be carried out using watershed models in order to quantify the non-point source component and thereby help in the holistic management of the river.

The authors gratefully thank the National Commission for Science, Technology and Innovation of Kenya (NACOSTI) and the German Academic Exchange Service (DAAD) for funding this research.

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