This study analyses the reliability of an on-site MBR system for greywater treatment and reuse. To achieve this goal simulation was performed based on the IWA ASM1 model which was adapted to describe biological and physical mechanisms for MBR greywater treatment based systems. Model results were found to agree well with experimental data from an on site pilot greywater treatment plant, after which the calibrated model was used in a Monte Carlo mode for generating statistical data on the MBR system performance under different scenarios of failures and inflow loads variations. Effluents quality and their associated risks were successfully estimated.